PHYLOGENY OF Holothuria leucospilota (ECHINODERMATA: HOLOTHUROIDEA) AS INFERRED FROM CYTOCHROME C OXIDASE I mtDNA GENE SEQUENCES
DOI:
https://doi.org/10.33736/bjrst.263.2011Keywords:
Molecular systematics, Holothuria leucospilota, partial sequences of cytochrome c oxidase I gene, phylogeny treeAbstract
This study aimed to generate the genetic profile of Holothuria (Mertensiothuria) leucospilota (Brandt 1835) from Intan Besar Island, Langkawi, Kedah Darul Aman, Malaysia and then to determine the phylogenetic relationship between H. leucospilota and other members of genus Holothuria available in the GenBank using partial sequences of cytochrome c oxidase I (COI) mitochondrial DNA (mtDNA) gene. In this study, tree topologies of neighbour joining, maximum parsimony and maximum likelihood show that H. leucospilota has its own monophyletic clade clearly distinct from the other species and it is genetically closer to Holothuria (Acanthotrapeza) coluber Semper 1868.References
Brandt, J.F. 1835. Prodromus descriptionis animalium ab H. Mertensio in orbis terrarum circumnavigatione observatorum. Fasc. I. Petropoli, sumptibus Academiae, pp 42-62.
Felsenstein, J. (2004). "PHYLIP", Phylogeny Inference Package, version 3.6b (beta release). Seattle, WA: Department of Genome Sciences, University of Washington.
Jaeger, G.F. 1833. De Holothuriis. Dissertatio Inauguralis. Turici, pp 1-40.
Kamarudin, K.R., Rehan, A.M., Lukman, A.L., Ahmad, H.F., Anua, M.H., Nordin, N.F.H., Hashim, R., Hussin, R. & Usup, G. (2009). Coral Reef Sea Cucumbers in Malaysia. Malaysian Journal of Science, 28 (2): 171-186
https://doi.org/10.22452/mjs.vol28no2.6
Palumbi, S., Martin, A., Romano, S., McMillan, W.O., Stice, L., & Grabowski, G. (1991). The Simple Fool"s Guide To PCR. Honolulu: Department of Zoology and Kewalo Marine Laboratory.
Semper, C. (1868). Reisen im Archipel der Philippinen. 2. Wissenschaftliche Resultate. 1. Holothurien. Leipzig.:Wilhelm Engelmann.
Downloads
Published
How to Cite
Issue
Section
License
Copyright Transfer Statement for Journal
1) In signing this statement, the author(s) grant UNIMAS Publisher an exclusive license to publish their original research papers. The author(s) also grant UNIMAS Publisher permission to reproduce, recreate, translate, extract or summarize, and to distribute and display in any forms, formats, and media. The author(s) can reuse their papers in their future printed work without first requiring permission from UNIMAS Publisher, provided that the author(s) acknowledge and reference publication in the Journal.
2) For open access articles, the author(s) agree that their articles published under UNIMAS Publisher are distributed under the terms of the CC-BY-NC-SA (Creative Commons Attribution-Non Commercial-Share Alike 4.0 International License) which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original work of the author(s) is properly cited.
3) For subscription articles, the author(s) agree that UNIMAS Publisher holds copyright, or an exclusive license to publish. Readers or users may view, download, print, and copy the content, for academic purposes, subject to the following conditions of use: (a) any reuse of materials is subject to permission from UNIMAS Publisher; (b) archived materials may only be used for academic research; (c) archived materials may not be used for commercial purposes, which include but not limited to monetary compensation by means of sale, resale, license, transfer of copyright, loan, etc.; and (d) archived materials may not be re-published in any part, either in print or online.
4) The author(s) is/are responsible to ensure his or her or their submitted work is original and does not infringe any existing copyright, trademark, patent, statutory right, or propriety right of others. Corresponding author(s) has (have) obtained permission from all co-authors prior to submission to the journal. Upon submission of the manuscript, the author(s) agree that no similar work has been or will be submitted or published elsewhere in any language. If submitted manuscript includes materials from others, the authors have obtained the permission from the copyright owners.
5) In signing this statement, the author(s) declare(s) that the researches in which they have conducted are in compliance with the current laws of the respective country and UNIMAS Journal Publication Ethics Policy. Any experimentation or research involving human or the use of animal samples must obtain approval from Human or Animal Ethics Committee in their respective institutions. The author(s) agree and understand that UNIMAS Publisher is not responsible for any compensational claims or failure caused by the author(s) in fulfilling the above-mentioned requirements. The author(s) must accept the responsibility for releasing their materials upon request by Chief Editor or UNIMAS Publisher.
6) The author(s) should have participated sufficiently in the work and ensured the appropriateness of the content of the article. The author(s) should also agree that he or she has no commercial attachments (e.g. patent or license arrangement, equity interest, consultancies, etc.) that might pose any conflict of interest with the submitted manuscript. The author(s) also agree to make any relevant materials and data available upon request by the editor or UNIMAS Publisher.